Python 2 & 3 Interpreter for Apache Zeppelin

Configuration

Property Default Description
zeppelin.python python Path of the already installed Python binary (could be python2 or python3). If python is not in your $PATH you can set the absolute directory (example : /usr/bin/python)
zeppelin.python.maxResult 1000 Max number of dataframe rows to display.

Enabling Python Interpreter

In a notebook, to enable the Python interpreter, click on the Gear icon and select Python

Using the Python Interpreter

In a paragraph, use %python to select the Python interpreter and then input all commands.

The interpreter can only work if you already have python installed (the interpreter doesn't bring it own python binaries).

To access the help, type help()

Python environments

Default

By default, PythonInterpreter will use python command defined in zeppelin.python property to run python process. The interpreter can use all modules already installed (with pip, easy_install...)

Conda

Conda is an package management system and environment management system for python. %python.conda interpreter lets you change between environments.

Usage

  • get the Conda Infomation:

    %python.conda info

  • list the Conda environments:

    %python.conda env list

  • create a conda enviornment: %python.conda create --name [ENV NAME]

  • activate an environment (python interpreter will be restarted):

    %python.conda activate [ENV NAME]

  • deactivate

    %python.conda deactivate

  • get installed package list inside the current environment

    %python.conda list

  • install package

    %python.conda install [PACKAGE NAME]

  • uninstall package

    %python.conda uninstall [PACKAGE NAME]

Docker

%python.docker interpreter allows PythonInterpreter creates python process in a specified docker container.

Usage

  • activate an environment

    %python.docker activate [Repository]
    %python.docker activate [Repository:Tag]
    %python.docker activate [Image Id]
    
  • deactivate

    %python.docker deactivate
    


Here is an example

# activate latest tensorflow image as a python environment
%python.docker activate gcr.io/tensorflow/tensorflow:latest

Using Zeppelin Dynamic Forms

You can leverage Zeppelin Dynamic Form inside your Python code.

Zeppelin Dynamic Form can only be used if py4j Python library is installed in your system. If not, you can install it with pip install py4j.

Example :

%python
### Input form
print (z.input("f1","defaultValue"))

### Select form
print (z.select("f1",[("o1","1"),("o2","2")],"2"))

### Checkbox form
print("".join(z.checkbox("f3", [("o1","1"), ("o2","2")],["1"])))

Matplotlib integration

The python interpreter can display matplotlib figures inline automatically using the pyplot module:

%python
import matplotlib.pyplot as plt
plt.plot([1, 2, 3])

This is the recommended method for using matplotlib from within a Zeppelin notebook. The output of this command will by default be converted to HTML by implicitly making use of the %html magic. Additional configuration can be achieved using the builtin z.configure_mpl() method. For example,

z.configure_mpl(width=400, height=300, fmt='svg')
plt.plot([1, 2, 3])

Will produce a 400x300 image in SVG format, which by default are normally 600x400 and PNG respectively. In the future, another option called angular can be used to make it possible to update a plot produced from one paragraph directly from another (the output will be %angular instead of %html). However, this feature is already available in the pyspark interpreter. More details can be found in the included "Zeppelin Tutorial: Python - matplotlib basic" tutorial notebook.

If Zeppelin cannot find the matplotlib backend files (which should usually be found in $ZEPPELIN_HOME/interpreter/lib/python) in your PYTHONPATH, then the backend will automatically be set to agg, and the (otherwise deprecated) instructions below can be used for more limited inline plotting.

If you are unable to load the inline backend, use z.show(plt): python %python import matplotlib.pyplot as plt plt.figure() (.. ..) z.show(plt) plt.close() The z.show() function can take optional parameters to adapt graph dimensions (width and height) as well as output format (png or optionally svg).

%python
z.show(plt, width='50px')
z.show(plt, height='150px', fmt='svg')

Pandas integration

Apache Zeppelin Table Display System provides built-in data visualization capabilities. Python interpreter leverages it to visualize Pandas DataFrames though similar z.show() API, same as with Matplotlib integration.

Example:

import pandas as pd
rates = pd.read_csv("bank.csv", sep=";")
z.show(rates)

SQL over Pandas DataFrames

There is a convenience %python.sql interpreter that matches Apache Spark experience in Zeppelin and enables usage of SQL language to query Pandas DataFrames and visualization of results though built-in Table Display System.

Pre-requests

  • Pandas pip install pandas
  • PandaSQL pip install -U pandasql

In case default binded interpreter is Python (first in the interpreter list, under the Gear Icon), you can just use it as %sql i.e

  • first paragraph

    import pandas as pd
    rates = pd.read_csv("bank.csv", sep=";")
    
  • next paragraph

    %sql
    SELECT * FROM rates WHERE age < 40
    

Otherwise it can be referred to as %python.sql

IPython Support

IPython is more powerful than the default python interpreter with extra functionality. You can use IPython with Python2 or Python3 which depends on which python you set zeppelin.python.

Pre-requests

- Jupyter `pip install jupyter`
- grpcio `pip install grpcio`

If you already install anaconda, then you just need to install grpcio as Jupyter is already included in anaconda.

In addition to all basic functions of the python interpreter, you can use all the IPython advanced features as you use it in Jupyter Notebook.

e.g.

Use IPython magic

%python.ipython

#python help
range?

#timeit
%timeit range(100)

Use matplotlib

%python.ipython


%matplotlib inline
import matplotlib.pyplot as plt

print("hello world")
data=[1,2,3,4]
plt.figure()
plt.plot(data)

We also make ZeppelinContext available in IPython Interpreter. You can use ZeppelinContext to create dynamic forms and display pandas DataFrame.

e.g.

Create dynamic form

z.input(name='my_name', defaultValue='hello')

Show pandas dataframe

import pandas as pd
df = pd.DataFrame({'id':[1,2,3], 'name':['a','b','c']})
z.show(df)

By default, we would use IPython in %python.python if IPython is available. Otherwise it would fall back to the original Python implementation. If you don't want to use IPython, then you can set zeppelin.python.useIPython as false in interpreter setting.

Technical description

For in-depth technical details on current implementation please refer to python/README.md.

Some features not yet implemented in the Python Interpreter

  • Interrupt a paragraph execution (cancel() method) is currently only supported in Linux and MacOs. If interpreter runs in another operating system (for instance MS Windows) , interrupt a paragraph will close the whole interpreter. A JIRA ticket (ZEPPELIN-893) is opened to implement this feature in a next release of the interpreter.
  • Progression bar in webUI (getProgress() method) is currently not implemented.
  • Code-completion is currently not implemented.